Index B | C | E | F | G | I | L | M | P | R | S | T | U | V | W B bodyPoints() (in module crispy.pruning.pruning) branchedPoints() (in module crispy.pruning.pruning) C chunk_data() (in module crispy.scms) classify_structure() (crispy.pruning.Skeleton.Skeleton method) (in module crispy.pruning.pruning) clean_grid() (in module crispy.grid_ridge) clean_grid_ppv() (in module crispy.grid_ridge) crispy module crispy.grid_ridge module crispy.image_ridge_find module crispy.pruning module crispy.pruning.pruning module crispy.pruning.Skeleton module crispy.pruning.structures module crispy.scms module crispy.visualize module E endPoints() (in module crispy.pruning.pruning) euclidean_dist() (in module crispy.scms) F find_ridge() (in module crispy.scms) G get_2d_length() (in module crispy.grid_ridge) get_base_block() (in module crispy.pruning.structures) get_footprints() (in module crispy.pruning.structures) grid_skel() (in module crispy.grid_ridge) grid_skeleton() (in module crispy.grid_ridge) I image2data() (in module crispy.image_ridge_find) init_branch_properties() (crispy.pruning.Skeleton.Skeleton method) (in module crispy.pruning.pruning) init_lengths_3D() (in module crispy.pruning.pruning) L label_ridge() (in module crispy.grid_ridge) longest_path() (crispy.pruning.Skeleton.Skeleton method) M main_length() (crispy.pruning.Skeleton.Skeleton method) main_length_3D() (in module crispy.pruning.pruning) make_skeleton() (in module crispy.grid_ridge) mask_trace_3D() (in module crispy.visualize) module crispy crispy.grid_ridge crispy.image_ridge_find crispy.pruning crispy.pruning.pruning crispy.pruning.Skeleton crispy.pruning.structures crispy.scms crispy.visualize P pre_graph() (crispy.pruning.Skeleton.Skeleton method) pre_graph_3D() (in module crispy.pruning.pruning) prune_from_scratch() (crispy.pruning.Skeleton.Skeleton method) prune_graph() (crispy.pruning.Skeleton.Skeleton method) R read_output() (in module crispy.image_ridge_find) read_table() (in module crispy.grid_ridge) remove_bad_branches() (crispy.pruning.Skeleton.Skeleton method) remove_bad_ppv_branches() (in module crispy.pruning.pruning) render_point_cloud() (in module crispy.visualize) render_volume() (in module crispy.visualize) ridge_trace_3D() (in module crispy.visualize) run() (in module crispy.image_ridge_find) S save_pruned_skel() (crispy.pruning.Skeleton.Skeleton method) segment_len() (in module crispy.pruning.pruning) shift_particles() (in module crispy.scms) shift_wakers_multiproc() (in module crispy.scms) shift_walkers() (in module crispy.scms) skel_volume() (in module crispy.visualize) Skeleton (class in crispy.pruning.Skeleton) T threshold_local() (in module crispy.image_ridge_find) U uniq_per_pix() (in module crispy.grid_ridge) V vectorized_gaussian() (in module crispy.scms) W walk_through_segment_3D() (in module crispy.pruning.pruning) wgauss_n_filtered_points() (in module crispy.scms) wgauss_n_filtered_points_multiproc() (in module crispy.scms) write_output() (in module crispy.image_ridge_find) write_skel() (in module crispy.grid_ridge)
